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Cluster: HRGMv2_0975_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0975_19 HRGMv2_0975_19_11 15484 16860 - GH13_20
TC HRGMv2_0975_19 HRGMv2_0975_19_12 17014 18210 - 2.A.1.2.18
TC HRGMv2_0975_19 HRGMv2_0975_19_13 18331 20691 - 9.A.8.1.6
peptidase HRGMv2_0975_19 HRGMv2_0975_19_14 21165 22064 - S09.UPW
TC HRGMv2_0975_19 HRGMv2_0975_19_15 22308 22871 + 4.A.1.2.6
pfam HRGMv2_0975_19 HRGMv2_0975_19_16 23053 24456 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0975_19 HRGMv2_0975_19_17 24715 25500 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0975_19 HRGMv2_0975_19_18 25661 26641 + 3.A.1.34.1
TC HRGMv2_0975_19 HRGMv2_0975_19_19 26845 27768 + 3.A.1.34.1
TC HRGMv2_0975_19 HRGMv2_0975_19_20 27761 28555 + 3.A.1.34.1
Gene ID: HRGMv2_0975_19_11
Type: CAZyme
Location: 15484 - 16860 (-)
Gene ID: HRGMv2_0975_19_12
Type: TC
Location: 17014 - 18210 (-)
Gene ID: HRGMv2_0975_19_13
Type: TC
Location: 18331 - 20691 (-)
Gene ID: HRGMv2_0975_19_14
Type: peptidase
Location: 21165 - 22064 (-)
Gene ID: HRGMv2_0975_19_15
Type: TC
Location: 22308 - 22871 (+)
Gene ID: HRGMv2_0975_19_16
Type: pfam
Location: 23053 - 24456 (+)
Gene ID: HRGMv2_0975_19_17
Type:
Location: 24715 - 25500 (+)
Gene ID: HRGMv2_0975_19_18
Type: TC
Location: 25661 - 26641 (+)
Gene ID: HRGMv2_0975_19_19
Type: TC
Location: 26845 - 27768 (+)
Gene ID: HRGMv2_0975_19_20
Type: TC
Location: 27761 - 28555 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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