dbCAN Logo

Cluster: HRGMv2_0974_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0974_13 HRGMv2_0974_13_42 39381 40757 - GH13_20
TC HRGMv2_0974_13 HRGMv2_0974_13_43 40912 42108 - 2.A.1.2.18
TC HRGMv2_0974_13 HRGMv2_0974_13_44 42229 44589 - 9.A.8.1.6
peptidase HRGMv2_0974_13 HRGMv2_0974_13_45 45063 45962 - S09.UPW
TC HRGMv2_0974_13 HRGMv2_0974_13_46 46206 46769 + 4.A.1.2.6
pfam HRGMv2_0974_13 HRGMv2_0974_13_47 46951 48354 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0974_13 HRGMv2_0974_13_48 48613 49401 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0974_13 HRGMv2_0974_13_49 49561 50541 + 3.A.1.34.1
TC HRGMv2_0974_13 HRGMv2_0974_13_50 50745 51668 + 3.A.1.34.1
TC HRGMv2_0974_13 HRGMv2_0974_13_51 51661 52455 + 3.A.1.34.1
Gene ID: HRGMv2_0974_13_42
Type: CAZyme
Location: 39381 - 40757 (-)
Gene ID: HRGMv2_0974_13_43
Type: TC
Location: 40912 - 42108 (-)
Gene ID: HRGMv2_0974_13_44
Type: TC
Location: 42229 - 44589 (-)
Gene ID: HRGMv2_0974_13_45
Type: peptidase
Location: 45063 - 45962 (-)
Gene ID: HRGMv2_0974_13_46
Type: TC
Location: 46206 - 46769 (+)
Gene ID: HRGMv2_0974_13_47
Type: pfam
Location: 46951 - 48354 (+)
Gene ID: HRGMv2_0974_13_48
Type:
Location: 48613 - 49401 (+)
Gene ID: HRGMv2_0974_13_49
Type: TC
Location: 49561 - 50541 (+)
Gene ID: HRGMv2_0974_13_50
Type: TC
Location: 50745 - 51668 (+)
Gene ID: HRGMv2_0974_13_51
Type: TC
Location: 51661 - 52455 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List