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Cluster: HRGMv2_0974_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0974_4 HRGMv2_0974_4_11 14709 17159 - 4.A.1.1.8
NULL(UNKNOWN) HRGMv2_0974_4 HRGMv2_0974_4_12 17181 17300 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_0974_4 HRGMv2_0974_4_13 17384 18103 + GntR
TC HRGMv2_0974_4 HRGMv2_0974_4_14 18410 19726 + 3.A.1.1.45
TC HRGMv2_0974_4 HRGMv2_0974_4_15 19814 20668 + 3.A.1.1.45
TC HRGMv2_0974_4 HRGMv2_0974_4_16 20668 21507 + 3.A.1.1.45
TC HRGMv2_0974_4 HRGMv2_0974_4_17 21576 22775 + 3.A.1.1.22
CAZyme HRGMv2_0974_4 HRGMv2_0974_4_18 23072 25339 - GT35
CAZyme HRGMv2_0974_4 HRGMv2_0974_4_19 25468 26973 - GH77
Gene ID: HRGMv2_0974_4_11
Type: TC
Location: 14709 - 17159 (-)
Gene ID: HRGMv2_0974_4_12
Type:
Location: 17181 - 17300 (+)
Gene ID: HRGMv2_0974_4_13
Type: TF
Location: 17384 - 18103 (+)
Gene ID: HRGMv2_0974_4_14
Type: TC
Location: 18410 - 19726 (+)
Gene ID: HRGMv2_0974_4_15
Type: TC
Location: 19814 - 20668 (+)
Gene ID: HRGMv2_0974_4_16
Type: TC
Location: 20668 - 21507 (+)
Gene ID: HRGMv2_0974_4_17
Type: TC
Location: 21576 - 22775 (+)
Gene ID: HRGMv2_0974_4_18
Type: CAZyme
Location: 23072 - 25339 (-)
Gene ID: HRGMv2_0974_4_19
Type: CAZyme
Location: 25468 - 26973 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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