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Cluster: HRGMv2_0973_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0973_44 HRGMv2_0973_44_5 3580 4749 - CE9
STP HRGMv2_0973_44 HRGMv2_0973_44_6 4867 6033 - SIS | SIS
TF HRGMv2_0973_44 HRGMv2_0973_44_7 6148 6879 - GntR
TC HRGMv2_0973_44 HRGMv2_0973_44_8 7065 8147 - 4.A.6.1.4
TC HRGMv2_0973_44 HRGMv2_0973_44_9 8137 8937 - 4.A.6.1.4
TC HRGMv2_0973_44 HRGMv2_0973_44_10 9028 9510 - 4.A.6.1.4
pfam HRGMv2_0973_44 HRGMv2_0973_44_11 9547 9828 - YajC
TC HRGMv2_0973_44 HRGMv2_0973_44_12 9828 10271 - 4.A.6.1.16
Gene ID: HRGMv2_0973_44_5
Type: CAZyme
Location: 3580 - 4749 (-)
Gene ID: HRGMv2_0973_44_6
Type: STP
Location: 4867 - 6033 (-)
Gene ID: HRGMv2_0973_44_7
Type: TF
Location: 6148 - 6879 (-)
Gene ID: HRGMv2_0973_44_8
Type: TC
Location: 7065 - 8147 (-)
Gene ID: HRGMv2_0973_44_9
Type: TC
Location: 8137 - 8937 (-)
Gene ID: HRGMv2_0973_44_10
Type: TC
Location: 9028 - 9510 (-)
Gene ID: HRGMv2_0973_44_11
Type: pfam
Location: 9547 - 9828 (-)
Gene ID: HRGMv2_0973_44_12
Type: TC
Location: 9828 - 10271 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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