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Cluster: HRGMv2_0972_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0972_42 HRGMv2_0972_42_4 2456 3625 - CE9
STP HRGMv2_0972_42 HRGMv2_0972_42_5 3743 4909 - SIS | SIS
TF HRGMv2_0972_42 HRGMv2_0972_42_6 5024 5755 - GntR
TC HRGMv2_0972_42 HRGMv2_0972_42_7 5941 7023 - 4.A.6.1.4
TC HRGMv2_0972_42 HRGMv2_0972_42_8 7013 7813 - 4.A.6.1.4
TC HRGMv2_0972_42 HRGMv2_0972_42_9 7904 8386 - 4.A.6.1.4
pfam HRGMv2_0972_42 HRGMv2_0972_42_10 8423 8704 - YajC
TC HRGMv2_0972_42 HRGMv2_0972_42_11 8704 9147 - 4.A.6.1.16
Gene ID: HRGMv2_0972_42_4
Type: CAZyme
Location: 2456 - 3625 (-)
Gene ID: HRGMv2_0972_42_5
Type: STP
Location: 3743 - 4909 (-)
Gene ID: HRGMv2_0972_42_6
Type: TF
Location: 5024 - 5755 (-)
Gene ID: HRGMv2_0972_42_7
Type: TC
Location: 5941 - 7023 (-)
Gene ID: HRGMv2_0972_42_8
Type: TC
Location: 7013 - 7813 (-)
Gene ID: HRGMv2_0972_42_9
Type: TC
Location: 7904 - 8386 (-)
Gene ID: HRGMv2_0972_42_10
Type: pfam
Location: 8423 - 8704 (-)
Gene ID: HRGMv2_0972_42_11
Type: TC
Location: 8704 - 9147 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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