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Cluster: HRGMv2_0972_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0972_16 HRGMv2_0972_16_12 11747 13252 + GH77
CAZyme HRGMv2_0972_16 HRGMv2_0972_16_13 13381 15648 + GT35
TC HRGMv2_0972_16 HRGMv2_0972_16_14 16103 17302 - 3.A.1.1.22
TC HRGMv2_0972_16 HRGMv2_0972_16_15 17371 18210 - 3.A.1.1.45
TC HRGMv2_0972_16 HRGMv2_0972_16_16 18210 19064 - 3.A.1.1.45
TC HRGMv2_0972_16 HRGMv2_0972_16_17 19152 20468 - 3.A.1.1.45
TF HRGMv2_0972_16 HRGMv2_0972_16_18 20777 21496 - GntR
TC HRGMv2_0972_16 HRGMv2_0972_16_19 21726 24176 + 4.A.1.1.8
Gene ID: HRGMv2_0972_16_12
Type: CAZyme
Location: 11747 - 13252 (+)
Gene ID: HRGMv2_0972_16_13
Type: CAZyme
Location: 13381 - 15648 (+)
Gene ID: HRGMv2_0972_16_14
Type: TC
Location: 16103 - 17302 (-)
Gene ID: HRGMv2_0972_16_15
Type: TC
Location: 17371 - 18210 (-)
Gene ID: HRGMv2_0972_16_16
Type: TC
Location: 18210 - 19064 (-)
Gene ID: HRGMv2_0972_16_17
Type: TC
Location: 19152 - 20468 (-)
Gene ID: HRGMv2_0972_16_18
Type: TF
Location: 20777 - 21496 (-)
Gene ID: HRGMv2_0972_16_19
Type: TC
Location: 21726 - 24176 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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