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Cluster: HRGMv2_0971_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0971_7 HRGMv2_0971_7_4 5386 6945 + 2.A.2.5.1
CAZyme HRGMv2_0971_7 HRGMv2_0971_7_5 7060 8655 + GH28
CAZyme HRGMv2_0971_7 HRGMv2_0971_7_6 8787 10952 + CE19 | CE8
pfam HRGMv2_0971_7 HRGMv2_0971_7_7 10970 11689 + Lipase_GDSL | Lipase_GDSL_2
CAZyme HRGMv2_0971_7 HRGMv2_0971_7_8 11797 13035 + GH105
Gene ID: HRGMv2_0971_7_4
Type: TC
Location: 5386 - 6945 (+)
Gene ID: HRGMv2_0971_7_5
Type: CAZyme
Location: 7060 - 8655 (+)
Gene ID: HRGMv2_0971_7_6
Type: CAZyme
Location: 8787 - 10952 (+)
Gene ID: HRGMv2_0971_7_7
Type: pfam
Location: 10970 - 11689 (+)
Gene ID: HRGMv2_0971_7_8
Type: CAZyme
Location: 11797 - 13035 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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