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Cluster: HRGMv2_0971_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0971_2 HRGMv2_0971_2_54 71215 72591 - 3.A.1.17.10
NULL(UNKNOWN) HRGMv2_0971_2 HRGMv2_0971_2_55 72595 73638 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0971_2 HRGMv2_0971_2_56 73641 75452 - 3.D.1.5.1
STP HRGMv2_0971_2 HRGMv2_0971_2_57 75446 77278 - Pyr_redox_2
CAZyme HRGMv2_0971_2 HRGMv2_0971_2_58 77535 78917 - GH4
TC HRGMv2_0971_2 HRGMv2_0971_2_59 78921 80537 - 4.A.1.1.3
pfam HRGMv2_0971_2 HRGMv2_0971_2_60 80637 81509 - PRD | PRD | CAT_RBD
TC HRGMv2_0971_2 HRGMv2_0971_2_61 81516 82028 - 4.A.1.2.5
STP HRGMv2_0971_2 HRGMv2_0971_2_62 82309 83070 - Fer4
TC HRGMv2_0971_2 HRGMv2_0971_2_63 83697 85967 - 1.I.1.1.3
STP HRGMv2_0971_2 HRGMv2_0971_2_64 86557 87519 + FHA
STP HRGMv2_0971_2 HRGMv2_0971_2_65 87691 89778 + Pkinase
TC HRGMv2_0971_2 HRGMv2_0971_2_66 90111 92453 + 3.A.3.5.15
Gene ID: HRGMv2_0971_2_54
Type: TC
Location: 71215 - 72591 (-)
Gene ID: HRGMv2_0971_2_55
Type:
Location: 72595 - 73638 (-)
Gene ID: HRGMv2_0971_2_56
Type: TC
Location: 73641 - 75452 (-)
Gene ID: HRGMv2_0971_2_57
Type: STP
Location: 75446 - 77278 (-)
Gene ID: HRGMv2_0971_2_58
Type: CAZyme
Location: 77535 - 78917 (-)
Gene ID: HRGMv2_0971_2_59
Type: TC
Location: 78921 - 80537 (-)
Gene ID: HRGMv2_0971_2_60
Type: pfam
Location: 80637 - 81509 (-)
Gene ID: HRGMv2_0971_2_61
Type: TC
Location: 81516 - 82028 (-)
Gene ID: HRGMv2_0971_2_62
Type: STP
Location: 82309 - 83070 (-)
Gene ID: HRGMv2_0971_2_63
Type: TC
Location: 83697 - 85967 (-)
Gene ID: HRGMv2_0971_2_64
Type: STP
Location: 86557 - 87519 (+)
Gene ID: HRGMv2_0971_2_65
Type: STP
Location: 87691 - 89778 (+)
Gene ID: HRGMv2_0971_2_66
Type: TC
Location: 90111 - 92453 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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