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Cluster: HRGMv2_0971_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0971_18 HRGMv2_0971_18_37 36913 38418 + GH77
CAZyme HRGMv2_0971_18 HRGMv2_0971_18_38 38547 40814 + GT35
TC HRGMv2_0971_18 HRGMv2_0971_18_39 41271 42470 - 3.A.1.1.22
TC HRGMv2_0971_18 HRGMv2_0971_18_40 42539 43378 - 3.A.1.1.45
TC HRGMv2_0971_18 HRGMv2_0971_18_41 43378 44232 - 3.A.1.1.45
TC HRGMv2_0971_18 HRGMv2_0971_18_42 44320 45636 - 3.A.1.1.45
TF HRGMv2_0971_18 HRGMv2_0971_18_43 45943 46662 - GntR
NULL(UNKNOWN) HRGMv2_0971_18 HRGMv2_0971_18_44 46746 46865 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0971_18 HRGMv2_0971_18_45 46887 49337 + 4.A.1.1.8
Gene ID: HRGMv2_0971_18_37
Type: CAZyme
Location: 36913 - 38418 (+)
Gene ID: HRGMv2_0971_18_38
Type: CAZyme
Location: 38547 - 40814 (+)
Gene ID: HRGMv2_0971_18_39
Type: TC
Location: 41271 - 42470 (-)
Gene ID: HRGMv2_0971_18_40
Type: TC
Location: 42539 - 43378 (-)
Gene ID: HRGMv2_0971_18_41
Type: TC
Location: 43378 - 44232 (-)
Gene ID: HRGMv2_0971_18_42
Type: TC
Location: 44320 - 45636 (-)
Gene ID: HRGMv2_0971_18_43
Type: TF
Location: 45943 - 46662 (-)
Gene ID: HRGMv2_0971_18_44
Type:
Location: 46746 - 46865 (-)
Gene ID: HRGMv2_0971_18_45
Type: TC
Location: 46887 - 49337 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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