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Cluster: HRGMv2_0971_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0971_15 HRGMv2_0971_15_6 6796 7626 - 3.A.1.132.3
pfam HRGMv2_0971_15 HRGMv2_0971_15_7 7886 10765 + UvrA_DNA-bind | UvrA_inter
pfam HRGMv2_0971_15 HRGMv2_0971_15_8 10898 11398 + tRNA_edit
TC HRGMv2_0971_15 HRGMv2_0971_15_9 11402 13084 + 2.A.66.4.4
pfam HRGMv2_0971_15 HRGMv2_0971_15_10 13091 15031 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0971_15 HRGMv2_0971_15_11 15397 17010 + 3.A.1.5.20
TC HRGMv2_0971_15 HRGMv2_0971_15_12 17168 18124 + 3.A.1.5.38
TC HRGMv2_0971_15 HRGMv2_0971_15_13 18128 20143 + 3.A.1.5.25
TC HRGMv2_0971_15 HRGMv2_0971_15_14 20144 20971 + 3.A.1.5.27
CAZyme HRGMv2_0971_15 HRGMv2_0971_15_15 21145 22029 + CE7
Gene ID: HRGMv2_0971_15_6
Type: TC
Location: 6796 - 7626 (-)
Gene ID: HRGMv2_0971_15_7
Type: pfam
Location: 7886 - 10765 (+)
Gene ID: HRGMv2_0971_15_8
Type: pfam
Location: 10898 - 11398 (+)
Gene ID: HRGMv2_0971_15_9
Type: TC
Location: 11402 - 13084 (+)
Gene ID: HRGMv2_0971_15_10
Type: pfam
Location: 13091 - 15031 (+)
Gene ID: HRGMv2_0971_15_11
Type: TC
Location: 15397 - 17010 (+)
Gene ID: HRGMv2_0971_15_12
Type: TC
Location: 17168 - 18124 (+)
Gene ID: HRGMv2_0971_15_13
Type: TC
Location: 18128 - 20143 (+)
Gene ID: HRGMv2_0971_15_14
Type: TC
Location: 20144 - 20971 (+)
Gene ID: HRGMv2_0971_15_15
Type: CAZyme
Location: 21145 - 22029 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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