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Cluster: HRGMv2_0970_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0970_14 HRGMv2_0970_14_5 3448 3891 + 4.A.6.1.16
pfam HRGMv2_0970_14 HRGMv2_0970_14_6 3891 4172 + YajC
TC HRGMv2_0970_14 HRGMv2_0970_14_7 4209 4691 + 4.A.6.1.4
TC HRGMv2_0970_14 HRGMv2_0970_14_8 4782 5582 + 4.A.6.1.4
TC HRGMv2_0970_14 HRGMv2_0970_14_9 5572 6654 + 4.A.6.1.4
TF HRGMv2_0970_14 HRGMv2_0970_14_10 6839 7570 + GntR
STP HRGMv2_0970_14 HRGMv2_0970_14_11 7685 8851 + SIS | SIS
CAZyme HRGMv2_0970_14 HRGMv2_0970_14_12 8971 10140 + CE9
Gene ID: HRGMv2_0970_14_5
Type: TC
Location: 3448 - 3891 (+)
Gene ID: HRGMv2_0970_14_6
Type: pfam
Location: 3891 - 4172 (+)
Gene ID: HRGMv2_0970_14_7
Type: TC
Location: 4209 - 4691 (+)
Gene ID: HRGMv2_0970_14_8
Type: TC
Location: 4782 - 5582 (+)
Gene ID: HRGMv2_0970_14_9
Type: TC
Location: 5572 - 6654 (+)
Gene ID: HRGMv2_0970_14_10
Type: TF
Location: 6839 - 7570 (+)
Gene ID: HRGMv2_0970_14_11
Type: STP
Location: 7685 - 8851 (+)
Gene ID: HRGMv2_0970_14_12
Type: CAZyme
Location: 8971 - 10140 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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