dbCAN Logo

Cluster: HRGMv2_0970_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0970_13 HRGMv2_0970_13_2 660 1544 - CE7
TC HRGMv2_0970_13 HRGMv2_0970_13_3 1718 2545 - 3.A.1.5.27
TC HRGMv2_0970_13 HRGMv2_0970_13_4 2546 4561 - 3.A.1.5.25
TC HRGMv2_0970_13 HRGMv2_0970_13_5 4565 5521 - 3.A.1.5.38
TC HRGMv2_0970_13 HRGMv2_0970_13_6 5677 7290 - 3.A.1.5.27
pfam HRGMv2_0970_13 HRGMv2_0970_13_7 7656 9596 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0970_13 HRGMv2_0970_13_8 9603 11906 - 2.A.66.4.4
pfam HRGMv2_0970_13 HRGMv2_0970_13_9 11910 12410 - tRNA_edit
pfam HRGMv2_0970_13 HRGMv2_0970_13_10 12544 15423 - UvrA_DNA-bind | UvrA_inter
TC HRGMv2_0970_13 HRGMv2_0970_13_11 15685 16515 + 3.A.1.132.3
Gene ID: HRGMv2_0970_13_2
Type: CAZyme
Location: 660 - 1544 (-)
Gene ID: HRGMv2_0970_13_3
Type: TC
Location: 1718 - 2545 (-)
Gene ID: HRGMv2_0970_13_4
Type: TC
Location: 2546 - 4561 (-)
Gene ID: HRGMv2_0970_13_5
Type: TC
Location: 4565 - 5521 (-)
Gene ID: HRGMv2_0970_13_6
Type: TC
Location: 5677 - 7290 (-)
Gene ID: HRGMv2_0970_13_7
Type: pfam
Location: 7656 - 9596 (-)
Gene ID: HRGMv2_0970_13_8
Type: TC
Location: 9603 - 11906 (-)
Gene ID: HRGMv2_0970_13_9
Type: pfam
Location: 11910 - 12410 (-)
Gene ID: HRGMv2_0970_13_10
Type: pfam
Location: 12544 - 15423 (-)
Gene ID: HRGMv2_0970_13_11
Type: TC
Location: 15685 - 16515 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List