dbCAN Logo

Cluster: HRGMv2_0970_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0970_7 HRGMv2_0970_7_2 384 2144 - 4.A.3.1.1
CAZyme HRGMv2_0970_7 HRGMv2_0970_7_3 2321 3763 - GH1
TF HRGMv2_0970_7 HRGMv2_0970_7_4 4105 5142 + LacI
CAZyme HRGMv2_0970_7 HRGMv2_0970_7_5 5410 6849 - GH1
TC HRGMv2_0970_7 HRGMv2_0970_7_6 6916 8691 - 4.A.3.1.1
TF HRGMv2_0970_7 HRGMv2_0970_7_7 9048 10052 + LacI
TC HRGMv2_0970_7 HRGMv2_0970_7_8 10267 10605 + 4.A.3.1.2
Gene ID: HRGMv2_0970_7_2
Type: TC
Location: 384 - 2144 (-)
Gene ID: HRGMv2_0970_7_3
Type: CAZyme
Location: 2321 - 3763 (-)
Gene ID: HRGMv2_0970_7_4
Type: TF
Location: 4105 - 5142 (+)
Gene ID: HRGMv2_0970_7_5
Type: CAZyme
Location: 5410 - 6849 (-)
Gene ID: HRGMv2_0970_7_6
Type: TC
Location: 6916 - 8691 (-)
Gene ID: HRGMv2_0970_7_7
Type: TF
Location: 9048 - 10052 (+)
Gene ID: HRGMv2_0970_7_8
Type: TC
Location: 10267 - 10605 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List