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Cluster: HRGMv2_0969_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0969_6 HRGMv2_0969_6_99 112328 113122 - 3.A.1.34.1
TC HRGMv2_0969_6 HRGMv2_0969_6_100 113115 114038 - 3.A.1.34.1
TC HRGMv2_0969_6 HRGMv2_0969_6_101 114242 115222 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0969_6 HRGMv2_0969_6_102 115383 116171 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0969_6 HRGMv2_0969_6_103 116430 117833 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0969_6 HRGMv2_0969_6_104 118015 118578 - 4.A.1.2.6
peptidase HRGMv2_0969_6 HRGMv2_0969_6_105 118824 119723 + S09.UPW
TC HRGMv2_0969_6 HRGMv2_0969_6_106 120197 122557 + 9.A.8.1.6
TC HRGMv2_0969_6 HRGMv2_0969_6_107 122682 123878 + 2.A.1.2.18
CAZyme HRGMv2_0969_6 HRGMv2_0969_6_108 124032 125408 + GH13_20
Gene ID: HRGMv2_0969_6_99
Type: TC
Location: 112328 - 113122 (-)
Gene ID: HRGMv2_0969_6_100
Type: TC
Location: 113115 - 114038 (-)
Gene ID: HRGMv2_0969_6_101
Type: TC
Location: 114242 - 115222 (-)
Gene ID: HRGMv2_0969_6_102
Type:
Location: 115383 - 116171 (-)
Gene ID: HRGMv2_0969_6_103
Type: pfam
Location: 116430 - 117833 (-)
Gene ID: HRGMv2_0969_6_104
Type: TC
Location: 118015 - 118578 (-)
Gene ID: HRGMv2_0969_6_105
Type: peptidase
Location: 118824 - 119723 (+)
Gene ID: HRGMv2_0969_6_106
Type: TC
Location: 120197 - 122557 (+)
Gene ID: HRGMv2_0969_6_107
Type: TC
Location: 122682 - 123878 (+)
Gene ID: HRGMv2_0969_6_108
Type: CAZyme
Location: 124032 - 125408 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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