Cluster: HRGMv2_0969_CGC7

🧬 Cluster Details

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_0969_5	HRGMv2_0969_5_26	27898	29115	-	GT4
pfam	HRGMv2_0969_5	HRGMv2_0969_5_27	29128	29892	-	BcrAD_BadFG
pfam	HRGMv2_0969_5	HRGMv2_0969_5_28	30047	31210	-	HGD-D
TC	HRGMv2_0969_5	HRGMv2_0969_5_29	31287	32072	-	3.A.1.5.36
TC	HRGMv2_0969_5	HRGMv2_0969_5_30	32062	33057	-	3.A.1.5.37
TC	HRGMv2_0969_5	HRGMv2_0969_5_31	33061	33888	-	3.A.1.5.39
TC	HRGMv2_0969_5	HRGMv2_0969_5_32	33888	34808	-	3.A.1.5.39
TC	HRGMv2_0969_5	HRGMv2_0969_5_33	34930	36540	-	3.A.1.5.11
pfam	HRGMv2_0969_5	HRGMv2_0969_5_34	36725	38008	-	HGD-D
TC	HRGMv2_0969_5	HRGMv2_0969_5_35	38456	39526	-	3.A.1.1.3
TC	HRGMv2_0969_5	HRGMv2_0969_5_36	39530	40972	-	3.A.1.8.1

Gene ID: HRGMv2_0969_5_26
Type: CAZyme
Location: 27898 - 29115 (-)

Gene ID: HRGMv2_0969_5_27
Type: pfam
Location: 29128 - 29892 (-)

Gene ID: HRGMv2_0969_5_28
Type: pfam
Location: 30047 - 31210 (-)

Gene ID: HRGMv2_0969_5_29
Type: TC
Location: 31287 - 32072 (-)

Gene ID: HRGMv2_0969_5_30
Type: TC
Location: 32062 - 33057 (-)

Gene ID: HRGMv2_0969_5_31
Type: TC
Location: 33061 - 33888 (-)

Gene ID: HRGMv2_0969_5_32
Type: TC
Location: 33888 - 34808 (-)

Gene ID: HRGMv2_0969_5_33
Type: TC
Location: 34930 - 36540 (-)

Gene ID: HRGMv2_0969_5_34
Type: pfam
Location: 36725 - 38008 (-)

Gene ID: HRGMv2_0969_5_35
Type: TC
Location: 38456 - 39526 (-)

Gene ID: HRGMv2_0969_5_36
Type: TC
Location: 39530 - 40972 (-)

Taxonomic Lineage

Domain

→

Phylum

→

Class

→

Order

→

Family

→

Genus

→

Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Gene ID	Condition Pair	log2FC	FDR P-value
HRGMv2_0969_5_26	vegan > omnivore	1.56025	0.01389
HRGMv2_0969_5_29	vegan > omnivore	2.97940	0.01389
HRGMv2_0969_5_31	vegan > omnivore	3.13715	0.01389
HRGMv2_0969_5_32	vegan > omnivore	2.83857	0.01389
HRGMv2_0969_5_33	vegan > omnivore	3.39915	0.01389