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Cluster: HRGMv2_0969_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0969_2 HRGMv2_0969_2_90 103323 103766 + 4.A.6.1.16
pfam HRGMv2_0969_2 HRGMv2_0969_2_91 103766 104047 + YajC
TC HRGMv2_0969_2 HRGMv2_0969_2_92 104084 104566 + 4.A.6.1.4
TC HRGMv2_0969_2 HRGMv2_0969_2_93 104657 105457 + 4.A.6.1.4
TC HRGMv2_0969_2 HRGMv2_0969_2_94 105447 106529 + 4.A.6.1.4
TF HRGMv2_0969_2 HRGMv2_0969_2_95 106715 107446 + GntR
STP HRGMv2_0969_2 HRGMv2_0969_2_96 107561 108727 + SIS | SIS
CAZyme HRGMv2_0969_2 HRGMv2_0969_2_97 108845 110014 + CE9
Gene ID: HRGMv2_0969_2_90
Type: TC
Location: 103323 - 103766 (+)
Gene ID: HRGMv2_0969_2_91
Type: pfam
Location: 103766 - 104047 (+)
Gene ID: HRGMv2_0969_2_92
Type: TC
Location: 104084 - 104566 (+)
Gene ID: HRGMv2_0969_2_93
Type: TC
Location: 104657 - 105457 (+)
Gene ID: HRGMv2_0969_2_94
Type: TC
Location: 105447 - 106529 (+)
Gene ID: HRGMv2_0969_2_95
Type: TF
Location: 106715 - 107446 (+)
Gene ID: HRGMv2_0969_2_96
Type: STP
Location: 107561 - 108727 (+)
Gene ID: HRGMv2_0969_2_97
Type: CAZyme
Location: 108845 - 110014 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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