dbCAN Logo

Cluster: HRGMv2_0969_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0969_22 HRGMv2_0969_22_10 11724 13229 + GH77
CAZyme HRGMv2_0969_22 HRGMv2_0969_22_11 13358 15625 + GT35
TC HRGMv2_0969_22 HRGMv2_0969_22_12 16157 17356 - 3.A.1.1.22
TC HRGMv2_0969_22 HRGMv2_0969_22_13 17425 18264 - 3.A.1.1.45
TC HRGMv2_0969_22 HRGMv2_0969_22_14 18264 19118 - 3.A.1.1.45
TC HRGMv2_0969_22 HRGMv2_0969_22_15 19206 20522 - 3.A.1.1.45
TF HRGMv2_0969_22 HRGMv2_0969_22_16 20829 21548 - GntR
NULL(UNKNOWN) HRGMv2_0969_22 HRGMv2_0969_22_17 21632 21751 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0969_22 HRGMv2_0969_22_18 21773 24223 + 4.A.1.1.8
Gene ID: HRGMv2_0969_22_10
Type: CAZyme
Location: 11724 - 13229 (+)
Gene ID: HRGMv2_0969_22_11
Type: CAZyme
Location: 13358 - 15625 (+)
Gene ID: HRGMv2_0969_22_12
Type: TC
Location: 16157 - 17356 (-)
Gene ID: HRGMv2_0969_22_13
Type: TC
Location: 17425 - 18264 (-)
Gene ID: HRGMv2_0969_22_14
Type: TC
Location: 18264 - 19118 (-)
Gene ID: HRGMv2_0969_22_15
Type: TC
Location: 19206 - 20522 (-)
Gene ID: HRGMv2_0969_22_16
Type: TF
Location: 20829 - 21548 (-)
Gene ID: HRGMv2_0969_22_17
Type:
Location: 21632 - 21751 (-)
Gene ID: HRGMv2_0969_22_18
Type: TC
Location: 21773 - 24223 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List