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Cluster: HRGMv2_0969_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0969_21 HRGMv2_0969_21_17 16664 17590 - CE7
TC HRGMv2_0969_21 HRGMv2_0969_21_18 17722 18549 - 3.A.1.5.27
TC HRGMv2_0969_21 HRGMv2_0969_21_19 18550 20565 - 3.A.1.5.25
TC HRGMv2_0969_21 HRGMv2_0969_21_20 20569 21525 - 3.A.1.5.38
TC HRGMv2_0969_21 HRGMv2_0969_21_21 21683 23296 - 3.A.1.5.27
pfam HRGMv2_0969_21 HRGMv2_0969_21_22 23662 25602 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0969_21 HRGMv2_0969_21_23 25609 27291 - 2.A.66.4.4
Gene ID: HRGMv2_0969_21_17
Type: CAZyme
Location: 16664 - 17590 (-)
Gene ID: HRGMv2_0969_21_18
Type: TC
Location: 17722 - 18549 (-)
Gene ID: HRGMv2_0969_21_19
Type: TC
Location: 18550 - 20565 (-)
Gene ID: HRGMv2_0969_21_20
Type: TC
Location: 20569 - 21525 (-)
Gene ID: HRGMv2_0969_21_21
Type: TC
Location: 21683 - 23296 (-)
Gene ID: HRGMv2_0969_21_22
Type: pfam
Location: 23662 - 25602 (-)
Gene ID: HRGMv2_0969_21_23
Type: TC
Location: 25609 - 27291 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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