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Cluster: HRGMv2_0969_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0969_19 HRGMv2_0969_19_2 1057 1593 - 4.A.1.2.6
CAZyme HRGMv2_0969_19 HRGMv2_0969_19_3 1861 3309 - GH1
TF HRGMv2_0969_19 HRGMv2_0969_19_4 3482 4489 - HTH_AraC
CAZyme HRGMv2_0969_19 HRGMv2_0969_19_5 4606 7206 + GH106
TF HRGMv2_0969_19 HRGMv2_0969_19_6 7249 8103 + HTH_6
STP HRGMv2_0969_19 HRGMv2_0969_19_7 8451 9131 - Pribosyltran
TC HRGMv2_0969_19 HRGMv2_0969_19_8 9570 12338 + 3.A.3.4.1
Gene ID: HRGMv2_0969_19_2
Type: TC
Location: 1057 - 1593 (-)
Gene ID: HRGMv2_0969_19_3
Type: CAZyme
Location: 1861 - 3309 (-)
Gene ID: HRGMv2_0969_19_4
Type: TF
Location: 3482 - 4489 (-)
Gene ID: HRGMv2_0969_19_5
Type: CAZyme
Location: 4606 - 7206 (+)
Gene ID: HRGMv2_0969_19_6
Type: TF
Location: 7249 - 8103 (+)
Gene ID: HRGMv2_0969_19_7
Type: STP
Location: 8451 - 9131 (-)
Gene ID: HRGMv2_0969_19_8
Type: TC
Location: 9570 - 12338 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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