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Cluster: HRGMv2_0968_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0968_40 HRGMv2_0968_40_1 3 545 - 4.A.1.1.8
TF HRGMv2_0968_40 HRGMv2_0968_40_2 808 1527 + GntR
TC HRGMv2_0968_40 HRGMv2_0968_40_3 1834 3150 + 3.A.1.1.45
TC HRGMv2_0968_40 HRGMv2_0968_40_4 3238 4092 + 3.A.1.1.45
TC HRGMv2_0968_40 HRGMv2_0968_40_5 4092 4931 + 3.A.1.1.45
TC HRGMv2_0968_40 HRGMv2_0968_40_6 5000 6199 + 3.A.1.1.22
CAZyme HRGMv2_0968_40 HRGMv2_0968_40_7 6654 8921 - GT35
CAZyme HRGMv2_0968_40 HRGMv2_0968_40_8 9050 10555 - GH77
Gene ID: HRGMv2_0968_40_1
Type: TC
Location: 3 - 545 (-)
Gene ID: HRGMv2_0968_40_2
Type: TF
Location: 808 - 1527 (+)
Gene ID: HRGMv2_0968_40_3
Type: TC
Location: 1834 - 3150 (+)
Gene ID: HRGMv2_0968_40_4
Type: TC
Location: 3238 - 4092 (+)
Gene ID: HRGMv2_0968_40_5
Type: TC
Location: 4092 - 4931 (+)
Gene ID: HRGMv2_0968_40_6
Type: TC
Location: 5000 - 6199 (+)
Gene ID: HRGMv2_0968_40_7
Type: CAZyme
Location: 6654 - 8921 (-)
Gene ID: HRGMv2_0968_40_8
Type: CAZyme
Location: 9050 - 10555 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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