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Cluster: HRGMv2_0967_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0967_8 HRGMv2_0967_8_9 9530 9868 - 4.A.3.1.2
TF HRGMv2_0967_8 HRGMv2_0967_8_10 10083 11087 - LacI
TC HRGMv2_0967_8 HRGMv2_0967_8_11 11445 13220 + 4.A.3.1.1
CAZyme HRGMv2_0967_8 HRGMv2_0967_8_12 13287 14726 + GH1
TF HRGMv2_0967_8 HRGMv2_0967_8_13 14988 16025 - LacI
CAZyme HRGMv2_0967_8 HRGMv2_0967_8_14 16367 17809 + GH1
TC HRGMv2_0967_8 HRGMv2_0967_8_15 17986 19746 + 4.A.3.1.1
TF HRGMv2_0967_8 HRGMv2_0967_8_16 20081 21091 - LacI
TC HRGMv2_0967_8 HRGMv2_0967_8_17 21367 23124 + 4.A.3.1.1
CAZyme HRGMv2_0967_8 HRGMv2_0967_8_18 23200 24621 + GH1
Gene ID: HRGMv2_0967_8_9
Type: TC
Location: 9530 - 9868 (-)
Gene ID: HRGMv2_0967_8_10
Type: TF
Location: 10083 - 11087 (-)
Gene ID: HRGMv2_0967_8_11
Type: TC
Location: 11445 - 13220 (+)
Gene ID: HRGMv2_0967_8_12
Type: CAZyme
Location: 13287 - 14726 (+)
Gene ID: HRGMv2_0967_8_13
Type: TF
Location: 14988 - 16025 (-)
Gene ID: HRGMv2_0967_8_14
Type: CAZyme
Location: 16367 - 17809 (+)
Gene ID: HRGMv2_0967_8_15
Type: TC
Location: 17986 - 19746 (+)
Gene ID: HRGMv2_0967_8_16
Type: TF
Location: 20081 - 21091 (-)
Gene ID: HRGMv2_0967_8_17
Type: TC
Location: 21367 - 23124 (+)
Gene ID: HRGMv2_0967_8_18
Type: CAZyme
Location: 23200 - 24621 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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