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Cluster: HRGMv2_0967_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0967_37 HRGMv2_0967_37_3 2862 4367 + GH77
CAZyme HRGMv2_0967_37 HRGMv2_0967_37_4 4496 6763 + GT35
TC HRGMv2_0967_37 HRGMv2_0967_37_5 7138 8337 - 3.A.1.1.22
TC HRGMv2_0967_37 HRGMv2_0967_37_6 8406 9245 - 3.A.1.1.45
TC HRGMv2_0967_37 HRGMv2_0967_37_7 9245 10099 - 3.A.1.1.45
TC HRGMv2_0967_37 HRGMv2_0967_37_8 10187 11503 - 3.A.1.1.45
TF HRGMv2_0967_37 HRGMv2_0967_37_9 11810 12529 - GntR
NULL(UNKNOWN) HRGMv2_0967_37 HRGMv2_0967_37_10 12613 12732 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0967_37 HRGMv2_0967_37_11 12754 15204 + 4.A.1.1.8
Gene ID: HRGMv2_0967_37_3
Type: CAZyme
Location: 2862 - 4367 (+)
Gene ID: HRGMv2_0967_37_4
Type: CAZyme
Location: 4496 - 6763 (+)
Gene ID: HRGMv2_0967_37_5
Type: TC
Location: 7138 - 8337 (-)
Gene ID: HRGMv2_0967_37_6
Type: TC
Location: 8406 - 9245 (-)
Gene ID: HRGMv2_0967_37_7
Type: TC
Location: 9245 - 10099 (-)
Gene ID: HRGMv2_0967_37_8
Type: TC
Location: 10187 - 11503 (-)
Gene ID: HRGMv2_0967_37_9
Type: TF
Location: 11810 - 12529 (-)
Gene ID: HRGMv2_0967_37_10
Type:
Location: 12613 - 12732 (-)
Gene ID: HRGMv2_0967_37_11
Type: TC
Location: 12754 - 15204 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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