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Cluster: HRGMv2_0965_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0965_8 HRGMv2_0965_8_22 21793 23298 + GH77
CAZyme HRGMv2_0965_8 HRGMv2_0965_8_23 23427 25694 + GT35
TC HRGMv2_0965_8 HRGMv2_0965_8_24 26151 27350 - 3.A.1.1.22
TC HRGMv2_0965_8 HRGMv2_0965_8_25 27419 28258 - 3.A.1.1.45
TC HRGMv2_0965_8 HRGMv2_0965_8_26 28258 29112 - 3.A.1.1.45
TC HRGMv2_0965_8 HRGMv2_0965_8_27 29200 30516 - 3.A.1.1.45
TF HRGMv2_0965_8 HRGMv2_0965_8_28 30823 31542 - GntR
TC HRGMv2_0965_8 HRGMv2_0965_8_29 31767 34217 + 4.A.1.1.8
Gene ID: HRGMv2_0965_8_22
Type: CAZyme
Location: 21793 - 23298 (+)
Gene ID: HRGMv2_0965_8_23
Type: CAZyme
Location: 23427 - 25694 (+)
Gene ID: HRGMv2_0965_8_24
Type: TC
Location: 26151 - 27350 (-)
Gene ID: HRGMv2_0965_8_25
Type: TC
Location: 27419 - 28258 (-)
Gene ID: HRGMv2_0965_8_26
Type: TC
Location: 28258 - 29112 (-)
Gene ID: HRGMv2_0965_8_27
Type: TC
Location: 29200 - 30516 (-)
Gene ID: HRGMv2_0965_8_28
Type: TF
Location: 30823 - 31542 (-)
Gene ID: HRGMv2_0965_8_29
Type: TC
Location: 31767 - 34217 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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