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Cluster: HRGMv2_0964_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0964_9 HRGMv2_0964_9_3 2621 5074 - 4.A.1.1.8
TF HRGMv2_0964_9 HRGMv2_0964_9_4 5299 6018 + GntR
TC HRGMv2_0964_9 HRGMv2_0964_9_5 6325 7641 + 3.A.1.1.45
TC HRGMv2_0964_9 HRGMv2_0964_9_6 7729 8583 + 3.A.1.1.45
TC HRGMv2_0964_9 HRGMv2_0964_9_7 8583 9422 + 3.A.1.1.45
TC HRGMv2_0964_9 HRGMv2_0964_9_8 9491 10690 + 3.A.1.1.22
CAZyme HRGMv2_0964_9 HRGMv2_0964_9_9 11144 13411 - GT35
CAZyme HRGMv2_0964_9 HRGMv2_0964_9_10 13539 15044 - GH77
Gene ID: HRGMv2_0964_9_3
Type: TC
Location: 2621 - 5074 (-)
Gene ID: HRGMv2_0964_9_4
Type: TF
Location: 5299 - 6018 (+)
Gene ID: HRGMv2_0964_9_5
Type: TC
Location: 6325 - 7641 (+)
Gene ID: HRGMv2_0964_9_6
Type: TC
Location: 7729 - 8583 (+)
Gene ID: HRGMv2_0964_9_7
Type: TC
Location: 8583 - 9422 (+)
Gene ID: HRGMv2_0964_9_8
Type: TC
Location: 9491 - 10690 (+)
Gene ID: HRGMv2_0964_9_9
Type: CAZyme
Location: 11144 - 13411 (-)
Gene ID: HRGMv2_0964_9_10
Type: CAZyme
Location: 13539 - 15044 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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