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Cluster: HRGMv2_0959_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0959_3 HRGMv2_0959_3_10 13621 15303 + 2.A.66.4.4
pfam HRGMv2_0959_3 HRGMv2_0959_3_11 15310 17250 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0959_3 HRGMv2_0959_3_12 17616 19229 + 3.A.1.5.27
TC HRGMv2_0959_3 HRGMv2_0959_3_13 19387 20343 + 3.A.1.5.38
TC HRGMv2_0959_3 HRGMv2_0959_3_14 20347 22362 + 3.A.1.5.25
TC HRGMv2_0959_3 HRGMv2_0959_3_15 22363 23190 + 3.A.1.5.27
CAZyme HRGMv2_0959_3 HRGMv2_0959_3_16 23364 24248 + CE7
Gene ID: HRGMv2_0959_3_10
Type: TC
Location: 13621 - 15303 (+)
Gene ID: HRGMv2_0959_3_11
Type: pfam
Location: 15310 - 17250 (+)
Gene ID: HRGMv2_0959_3_12
Type: TC
Location: 17616 - 19229 (+)
Gene ID: HRGMv2_0959_3_13
Type: TC
Location: 19387 - 20343 (+)
Gene ID: HRGMv2_0959_3_14
Type: TC
Location: 20347 - 22362 (+)
Gene ID: HRGMv2_0959_3_15
Type: TC
Location: 22363 - 23190 (+)
Gene ID: HRGMv2_0959_3_16
Type: CAZyme
Location: 23364 - 24248 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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