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Cluster: HRGMv2_0959_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0959_28 HRGMv2_0959_28_15 12156 13661 + GH77
CAZyme HRGMv2_0959_28 HRGMv2_0959_28_16 13790 16057 + GT35
TC HRGMv2_0959_28 HRGMv2_0959_28_17 16593 17792 - 3.A.1.1.22
TC HRGMv2_0959_28 HRGMv2_0959_28_18 17861 18700 - 3.A.1.1.45
TC HRGMv2_0959_28 HRGMv2_0959_28_19 18700 19554 - 3.A.1.1.45
TC HRGMv2_0959_28 HRGMv2_0959_28_20 19642 20958 - 3.A.1.1.45
TF HRGMv2_0959_28 HRGMv2_0959_28_21 21265 21984 - GntR
NULL(UNKNOWN) HRGMv2_0959_28 HRGMv2_0959_28_22 22068 22187 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0959_28 HRGMv2_0959_28_23 22209 24659 + 4.A.1.1.8
Gene ID: HRGMv2_0959_28_15
Type: CAZyme
Location: 12156 - 13661 (+)
Gene ID: HRGMv2_0959_28_16
Type: CAZyme
Location: 13790 - 16057 (+)
Gene ID: HRGMv2_0959_28_17
Type: TC
Location: 16593 - 17792 (-)
Gene ID: HRGMv2_0959_28_18
Type: TC
Location: 17861 - 18700 (-)
Gene ID: HRGMv2_0959_28_19
Type: TC
Location: 18700 - 19554 (-)
Gene ID: HRGMv2_0959_28_20
Type: TC
Location: 19642 - 20958 (-)
Gene ID: HRGMv2_0959_28_21
Type: TF
Location: 21265 - 21984 (-)
Gene ID: HRGMv2_0959_28_22
Type:
Location: 22068 - 22187 (-)
Gene ID: HRGMv2_0959_28_23
Type: TC
Location: 22209 - 24659 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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