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Cluster: HRGMv2_0959_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0959_19 HRGMv2_0959_19_1 140 934 - 3.A.1.34.1
TC HRGMv2_0959_19 HRGMv2_0959_19_2 927 1850 - 3.A.1.34.1
TC HRGMv2_0959_19 HRGMv2_0959_19_3 2055 3035 - 3.A.1.34.1
NULL(UNKNOWN) HRGMv2_0959_19 HRGMv2_0959_19_4 3196 3981 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0959_19 HRGMv2_0959_19_5 4231 5634 - tRNA-synt_2 | tRNA_anti-codon
TC HRGMv2_0959_19 HRGMv2_0959_19_6 5815 6456 - 4.A.1.2.6
peptidase HRGMv2_0959_19 HRGMv2_0959_19_7 6625 7524 + S09.UPW
NULL(UNKNOWN) HRGMv2_0959_19 HRGMv2_0959_19_8 7572 7892 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0959_19 HRGMv2_0959_19_9 8014 10374 + 9.A.8.1.6
TC HRGMv2_0959_19 HRGMv2_0959_19_10 10499 11695 + 2.A.1.2.18
CAZyme HRGMv2_0959_19 HRGMv2_0959_19_11 11849 13225 + GH13_20
Gene ID: HRGMv2_0959_19_1
Type: TC
Location: 140 - 934 (-)
Gene ID: HRGMv2_0959_19_2
Type: TC
Location: 927 - 1850 (-)
Gene ID: HRGMv2_0959_19_3
Type: TC
Location: 2055 - 3035 (-)
Gene ID: HRGMv2_0959_19_4
Type:
Location: 3196 - 3981 (-)
Gene ID: HRGMv2_0959_19_5
Type: pfam
Location: 4231 - 5634 (-)
Gene ID: HRGMv2_0959_19_6
Type: TC
Location: 5815 - 6456 (-)
Gene ID: HRGMv2_0959_19_7
Type: peptidase
Location: 6625 - 7524 (+)
Gene ID: HRGMv2_0959_19_8
Type:
Location: 7572 - 7892 (+)
Gene ID: HRGMv2_0959_19_9
Type: TC
Location: 8014 - 10374 (+)
Gene ID: HRGMv2_0959_19_10
Type: TC
Location: 10499 - 11695 (+)
Gene ID: HRGMv2_0959_19_11
Type: CAZyme
Location: 11849 - 13225 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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