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Cluster: HRGMv2_0956_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0956_22 HRGMv2_0956_22_17 21438 22814 - GH13_20
TC HRGMv2_0956_22 HRGMv2_0956_22_18 22969 24165 - 2.A.1.2.18
TC HRGMv2_0956_22 HRGMv2_0956_22_19 24286 26646 - 9.A.8.1.6
NULL(UNKNOWN) HRGMv2_0956_22 HRGMv2_0956_22_20 26717 27058 - NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0956_22 HRGMv2_0956_22_21 27187 28086 - S09.UPW
TC HRGMv2_0956_22 HRGMv2_0956_22_22 28330 28893 + 4.A.1.2.6
pfam HRGMv2_0956_22 HRGMv2_0956_22_23 29075 30478 + tRNA-synt_2 | tRNA_anti-codon
pfam HRGMv2_0956_22 HRGMv2_0956_22_24 30737 31522 + WYL
TC HRGMv2_0956_22 HRGMv2_0956_22_25 31683 32663 + 3.A.1.34.1
TC HRGMv2_0956_22 HRGMv2_0956_22_26 32868 33134 + 3.A.1.34.1
Gene ID: HRGMv2_0956_22_17
Type: CAZyme
Location: 21438 - 22814 (-)
Gene ID: HRGMv2_0956_22_18
Type: TC
Location: 22969 - 24165 (-)
Gene ID: HRGMv2_0956_22_19
Type: TC
Location: 24286 - 26646 (-)
Gene ID: HRGMv2_0956_22_20
Type:
Location: 26717 - 27058 (-)
Gene ID: HRGMv2_0956_22_21
Type: peptidase
Location: 27187 - 28086 (-)
Gene ID: HRGMv2_0956_22_22
Type: TC
Location: 28330 - 28893 (+)
Gene ID: HRGMv2_0956_22_23
Type: pfam
Location: 29075 - 30478 (+)
Gene ID: HRGMv2_0956_22_24
Type: pfam
Location: 30737 - 31522 (+)
Gene ID: HRGMv2_0956_22_25
Type: TC
Location: 31683 - 32663 (+)
Gene ID: HRGMv2_0956_22_26
Type: TC
Location: 32868 - 33134 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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