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Cluster: HRGMv2_0954_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0954_2 HRGMv2_0954_2_92 97244 99694 - 4.A.1.1.8
TF HRGMv2_0954_2 HRGMv2_0954_2_93 99924 100643 + GntR
TC HRGMv2_0954_2 HRGMv2_0954_2_94 100951 102267 + 3.A.1.1.45
TC HRGMv2_0954_2 HRGMv2_0954_2_95 102355 103209 + 3.A.1.1.45
TC HRGMv2_0954_2 HRGMv2_0954_2_96 103209 104048 + 3.A.1.1.45
TC HRGMv2_0954_2 HRGMv2_0954_2_97 104117 105316 + 3.A.1.1.22
CAZyme HRGMv2_0954_2 HRGMv2_0954_2_98 105613 107880 - GT35
CAZyme HRGMv2_0954_2 HRGMv2_0954_2_99 108009 109514 - GH77
Gene ID: HRGMv2_0954_2_92
Type: TC
Location: 97244 - 99694 (-)
Gene ID: HRGMv2_0954_2_93
Type: TF
Location: 99924 - 100643 (+)
Gene ID: HRGMv2_0954_2_94
Type: TC
Location: 100951 - 102267 (+)
Gene ID: HRGMv2_0954_2_95
Type: TC
Location: 102355 - 103209 (+)
Gene ID: HRGMv2_0954_2_96
Type: TC
Location: 103209 - 104048 (+)
Gene ID: HRGMv2_0954_2_97
Type: TC
Location: 104117 - 105316 (+)
Gene ID: HRGMv2_0954_2_98
Type: CAZyme
Location: 105613 - 107880 (-)
Gene ID: HRGMv2_0954_2_99
Type: CAZyme
Location: 108009 - 109514 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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