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Cluster: HRGMv2_0954_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0954_26 HRGMv2_0954_26_13 15988 17370 - GH4
TC HRGMv2_0954_26 HRGMv2_0954_26_14 17374 18990 - 4.A.1.1.3
pfam HRGMv2_0954_26 HRGMv2_0954_26_15 19090 19956 - PRD | PRD | CAT_RBD
TC HRGMv2_0954_26 HRGMv2_0954_26_16 19963 20475 - 4.A.1.2.2
STP HRGMv2_0954_26 HRGMv2_0954_26_17 20771 21532 - Fer4
TC HRGMv2_0954_26 HRGMv2_0954_26_18 22154 24397 - 1.I.1.1.3
Gene ID: HRGMv2_0954_26_13
Type: CAZyme
Location: 15988 - 17370 (-)
Gene ID: HRGMv2_0954_26_14
Type: TC
Location: 17374 - 18990 (-)
Gene ID: HRGMv2_0954_26_15
Type: pfam
Location: 19090 - 19956 (-)
Gene ID: HRGMv2_0954_26_16
Type: TC
Location: 19963 - 20475 (-)
Gene ID: HRGMv2_0954_26_17
Type: STP
Location: 20771 - 21532 (-)
Gene ID: HRGMv2_0954_26_18
Type: TC
Location: 22154 - 24397 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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