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Cluster: HRGMv2_0954_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0954_1 HRGMv2_0954_1_77 75432 75875 + 4.A.6.1.16
pfam HRGMv2_0954_1 HRGMv2_0954_1_78 75875 76156 + YajC
TC HRGMv2_0954_1 HRGMv2_0954_1_79 76193 76675 + 4.A.6.1.4
TC HRGMv2_0954_1 HRGMv2_0954_1_80 76766 77566 + 4.A.6.1.4
TC HRGMv2_0954_1 HRGMv2_0954_1_81 77556 78638 + 4.A.6.1.4
TF HRGMv2_0954_1 HRGMv2_0954_1_82 78824 79555 + GntR
STP HRGMv2_0954_1 HRGMv2_0954_1_83 79670 80836 + SIS | SIS
CAZyme HRGMv2_0954_1 HRGMv2_0954_1_84 80954 82123 + CE9
Gene ID: HRGMv2_0954_1_77
Type: TC
Location: 75432 - 75875 (+)
Gene ID: HRGMv2_0954_1_78
Type: pfam
Location: 75875 - 76156 (+)
Gene ID: HRGMv2_0954_1_79
Type: TC
Location: 76193 - 76675 (+)
Gene ID: HRGMv2_0954_1_80
Type: TC
Location: 76766 - 77566 (+)
Gene ID: HRGMv2_0954_1_81
Type: TC
Location: 77556 - 78638 (+)
Gene ID: HRGMv2_0954_1_82
Type: TF
Location: 78824 - 79555 (+)
Gene ID: HRGMv2_0954_1_83
Type: STP
Location: 79670 - 80836 (+)
Gene ID: HRGMv2_0954_1_84
Type: CAZyme
Location: 80954 - 82123 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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