dbCAN Logo

Cluster: HRGMv2_0951_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0951_3 HRGMv2_0951_3_62 74381 75550 - CE9
STP HRGMv2_0951_3 HRGMv2_0951_3_63 75668 76834 - SIS | SIS
TF HRGMv2_0951_3 HRGMv2_0951_3_64 76949 77680 - GntR
TC HRGMv2_0951_3 HRGMv2_0951_3_65 77866 78948 - 4.A.6.1.4
TC HRGMv2_0951_3 HRGMv2_0951_3_66 78938 79738 - 4.A.6.1.4
TC HRGMv2_0951_3 HRGMv2_0951_3_67 79829 80311 - 4.A.6.1.4
pfam HRGMv2_0951_3 HRGMv2_0951_3_68 80348 80629 - YajC
TC HRGMv2_0951_3 HRGMv2_0951_3_69 80629 81072 - 4.A.6.1.16
Gene ID: HRGMv2_0951_3_62
Type: CAZyme
Location: 74381 - 75550 (-)
Gene ID: HRGMv2_0951_3_63
Type: STP
Location: 75668 - 76834 (-)
Gene ID: HRGMv2_0951_3_64
Type: TF
Location: 76949 - 77680 (-)
Gene ID: HRGMv2_0951_3_65
Type: TC
Location: 77866 - 78948 (-)
Gene ID: HRGMv2_0951_3_66
Type: TC
Location: 78938 - 79738 (-)
Gene ID: HRGMv2_0951_3_67
Type: TC
Location: 79829 - 80311 (-)
Gene ID: HRGMv2_0951_3_68
Type: pfam
Location: 80348 - 80629 (-)
Gene ID: HRGMv2_0951_3_69
Type: TC
Location: 80629 - 81072 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0951_3_68 vegan > omnivore 1.03656 0.00863

🧭 Explore Read Mapping of CGC

← Back to Cluster List