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Cluster: HRGMv2_0950_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0950_7 HRGMv2_0950_7_10 12810 14102 - 2.A.1.2.93
STP HRGMv2_0950_7 HRGMv2_0950_7_11 14410 15051 + TetR_N
CAZyme HRGMv2_0950_7 HRGMv2_0950_7_12 15155 16468 - GH140
TC HRGMv2_0950_7 HRGMv2_0950_7_13 16679 18106 - 4.A.1.2.11
peptidase HRGMv2_0950_7 HRGMv2_0950_7_14 18597 19934 + S09.UPW
pfam HRGMv2_0950_7 HRGMv2_0950_7_15 20201 21712 + Sde182_NH-like
CAZyme HRGMv2_0950_7 HRGMv2_0950_7_16 21928 23358 - GH1
pfam HRGMv2_0950_7 HRGMv2_0950_7_17 23830 24474 - DUF4867
peptidase HRGMv2_0950_7 HRGMv2_0950_7_18 24652 25632 - S09.UPC
TC HRGMv2_0950_7 HRGMv2_0950_7_19 25739 27109 - 4.A.1.2.6
Gene ID: HRGMv2_0950_7_10
Type: TC
Location: 12810 - 14102 (-)
Gene ID: HRGMv2_0950_7_11
Type: STP
Location: 14410 - 15051 (+)
Gene ID: HRGMv2_0950_7_12
Type: CAZyme
Location: 15155 - 16468 (-)
Gene ID: HRGMv2_0950_7_13
Type: TC
Location: 16679 - 18106 (-)
Gene ID: HRGMv2_0950_7_14
Type: peptidase
Location: 18597 - 19934 (+)
Gene ID: HRGMv2_0950_7_15
Type: pfam
Location: 20201 - 21712 (+)
Gene ID: HRGMv2_0950_7_16
Type: CAZyme
Location: 21928 - 23358 (-)
Gene ID: HRGMv2_0950_7_17
Type: pfam
Location: 23830 - 24474 (-)
Gene ID: HRGMv2_0950_7_18
Type: peptidase
Location: 24652 - 25632 (-)
Gene ID: HRGMv2_0950_7_19
Type: TC
Location: 25739 - 27109 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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