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Cluster: HRGMv2_0950_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0950_3 HRGMv2_0950_3_200 223078 224583 + GH77
CAZyme HRGMv2_0950_3 HRGMv2_0950_3_201 224712 226979 + GT35
TC HRGMv2_0950_3 HRGMv2_0950_3_202 227436 228635 - 3.A.1.1.22
TC HRGMv2_0950_3 HRGMv2_0950_3_203 228704 229543 - 3.A.1.1.45
TC HRGMv2_0950_3 HRGMv2_0950_3_204 229543 230397 - 3.A.1.1.45
TC HRGMv2_0950_3 HRGMv2_0950_3_205 230485 231801 - 3.A.1.1.45
TF HRGMv2_0950_3 HRGMv2_0950_3_206 232108 232827 - GntR
NULL(UNKNOWN) HRGMv2_0950_3 HRGMv2_0950_3_207 232914 233030 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0950_3 HRGMv2_0950_3_208 233052 235502 + 4.A.1.1.8
Gene ID: HRGMv2_0950_3_200
Type: CAZyme
Location: 223078 - 224583 (+)
Gene ID: HRGMv2_0950_3_201
Type: CAZyme
Location: 224712 - 226979 (+)
Gene ID: HRGMv2_0950_3_202
Type: TC
Location: 227436 - 228635 (-)
Gene ID: HRGMv2_0950_3_203
Type: TC
Location: 228704 - 229543 (-)
Gene ID: HRGMv2_0950_3_204
Type: TC
Location: 229543 - 230397 (-)
Gene ID: HRGMv2_0950_3_205
Type: TC
Location: 230485 - 231801 (-)
Gene ID: HRGMv2_0950_3_206
Type: TF
Location: 232108 - 232827 (-)
Gene ID: HRGMv2_0950_3_207
Type:
Location: 232914 - 233030 (-)
Gene ID: HRGMv2_0950_3_208
Type: TC
Location: 233052 - 235502 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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