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Cluster: HRGMv2_0950_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0950_3 HRGMv2_0950_3_91 109090 109428 - 4.A.3.1.2
TF HRGMv2_0950_3 HRGMv2_0950_3_92 109643 110647 - LacI
TC HRGMv2_0950_3 HRGMv2_0950_3_93 111004 112773 + 4.A.3.1.1
CAZyme HRGMv2_0950_3 HRGMv2_0950_3_94 112840 114279 + GH1
TF HRGMv2_0950_3 HRGMv2_0950_3_95 114627 115637 - LacI
TC HRGMv2_0950_3 HRGMv2_0950_3_96 115914 117692 + 4.A.3.1.1
CAZyme HRGMv2_0950_3 HRGMv2_0950_3_97 117769 119190 + GH1
TF HRGMv2_0950_3 HRGMv2_0950_3_98 119795 120559 - HTH_DeoR
sulfatase HRGMv2_0950_3 HRGMv2_0950_3_99 120766 121818 + S1_4
TC HRGMv2_0950_3 HRGMv2_0950_3_100 121903 122382 - 4.A.6.1.5
Gene ID: HRGMv2_0950_3_91
Type: TC
Location: 109090 - 109428 (-)
Gene ID: HRGMv2_0950_3_92
Type: TF
Location: 109643 - 110647 (-)
Gene ID: HRGMv2_0950_3_93
Type: TC
Location: 111004 - 112773 (+)
Gene ID: HRGMv2_0950_3_94
Type: CAZyme
Location: 112840 - 114279 (+)
Gene ID: HRGMv2_0950_3_95
Type: TF
Location: 114627 - 115637 (-)
Gene ID: HRGMv2_0950_3_96
Type: TC
Location: 115914 - 117692 (+)
Gene ID: HRGMv2_0950_3_97
Type: CAZyme
Location: 117769 - 119190 (+)
Gene ID: HRGMv2_0950_3_98
Type: TF
Location: 119795 - 120559 (-)
Gene ID: HRGMv2_0950_3_99
Type: sulfatase
Location: 120766 - 121818 (+)
Gene ID: HRGMv2_0950_3_100
Type: TC
Location: 121903 - 122382 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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