dbCAN Logo

Cluster: HRGMv2_0950_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0950_1 HRGMv2_0950_1_10 13590 15272 + 2.A.66.4.4
pfam HRGMv2_0950_1 HRGMv2_0950_1_11 15279 17219 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0950_1 HRGMv2_0950_1_12 17583 19196 + 3.A.1.5.27
TC HRGMv2_0950_1 HRGMv2_0950_1_13 19354 20310 + 3.A.1.5.38
TC HRGMv2_0950_1 HRGMv2_0950_1_14 20314 22329 + 3.A.1.5.25
TC HRGMv2_0950_1 HRGMv2_0950_1_15 22330 23157 + 3.A.1.5.27
CAZyme HRGMv2_0950_1 HRGMv2_0950_1_16 23289 24215 + CE7
Gene ID: HRGMv2_0950_1_10
Type: TC
Location: 13590 - 15272 (+)
Gene ID: HRGMv2_0950_1_11
Type: pfam
Location: 15279 - 17219 (+)
Gene ID: HRGMv2_0950_1_12
Type: TC
Location: 17583 - 19196 (+)
Gene ID: HRGMv2_0950_1_13
Type: TC
Location: 19354 - 20310 (+)
Gene ID: HRGMv2_0950_1_14
Type: TC
Location: 20314 - 22329 (+)
Gene ID: HRGMv2_0950_1_15
Type: TC
Location: 22330 - 23157 (+)
Gene ID: HRGMv2_0950_1_16
Type: CAZyme
Location: 23289 - 24215 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List