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Cluster: HRGMv2_0949_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0949_22 HRGMv2_0949_22_7 9961 12264 + 2.A.66.4.4
pfam HRGMv2_0949_22 HRGMv2_0949_22_8 12271 14211 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0949_22 HRGMv2_0949_22_9 14575 16188 + 3.A.1.5.27
TC HRGMv2_0949_22 HRGMv2_0949_22_10 16346 17302 + 3.A.1.5.38
TC HRGMv2_0949_22 HRGMv2_0949_22_11 17306 19321 + 3.A.1.5.25
TC HRGMv2_0949_22 HRGMv2_0949_22_12 19322 20149 + 3.A.1.5.27
CAZyme HRGMv2_0949_22 HRGMv2_0949_22_13 20281 21207 + CE7
Gene ID: HRGMv2_0949_22_7
Type: TC
Location: 9961 - 12264 (+)
Gene ID: HRGMv2_0949_22_8
Type: pfam
Location: 12271 - 14211 (+)
Gene ID: HRGMv2_0949_22_9
Type: TC
Location: 14575 - 16188 (+)
Gene ID: HRGMv2_0949_22_10
Type: TC
Location: 16346 - 17302 (+)
Gene ID: HRGMv2_0949_22_11
Type: TC
Location: 17306 - 19321 (+)
Gene ID: HRGMv2_0949_22_12
Type: TC
Location: 19322 - 20149 (+)
Gene ID: HRGMv2_0949_22_13
Type: CAZyme
Location: 20281 - 21207 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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