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Cluster: HRGMv2_0948_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0948_6 HRGMv2_0948_6_2 1974 3440 - 2.A.66.2.23
pfam HRGMv2_0948_6 HRGMv2_0948_6_3 3525 4472 - ATPgrasp_TupA
pfam HRGMv2_0948_6 HRGMv2_0948_6_4 4616 5704 - EpsG
CAZyme HRGMv2_0948_6 HRGMv2_0948_6_5 5701 6804 - GT4
pfam HRGMv2_0948_6 HRGMv2_0948_6_6 6801 7748 - C5-epim_C
CAZyme HRGMv2_0948_6 HRGMv2_0948_6_7 7748 9040 - GT4
pfam HRGMv2_0948_6 HRGMv2_0948_6_8 9046 10317 - UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme HRGMv2_0948_6 HRGMv2_0948_6_9 10361 11278 - GT2
TC HRGMv2_0948_6 HRGMv2_0948_6_10 11282 12046 - 9.B.18.1.2
Gene ID: HRGMv2_0948_6_2
Type: TC
Location: 1974 - 3440 (-)
Gene ID: HRGMv2_0948_6_3
Type: pfam
Location: 3525 - 4472 (-)
Gene ID: HRGMv2_0948_6_4
Type: pfam
Location: 4616 - 5704 (-)
Gene ID: HRGMv2_0948_6_5
Type: CAZyme
Location: 5701 - 6804 (-)
Gene ID: HRGMv2_0948_6_6
Type: pfam
Location: 6801 - 7748 (-)
Gene ID: HRGMv2_0948_6_7
Type: CAZyme
Location: 7748 - 9040 (-)
Gene ID: HRGMv2_0948_6_8
Type: pfam
Location: 9046 - 10317 (-)
Gene ID: HRGMv2_0948_6_9
Type: CAZyme
Location: 10361 - 11278 (-)
Gene ID: HRGMv2_0948_6_10
Type: TC
Location: 11282 - 12046 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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