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Cluster: HRGMv2_0947_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0947_1 HRGMv2_0947_1_68 69411 69854 + 4.A.6.1.16
pfam HRGMv2_0947_1 HRGMv2_0947_1_69 69854 70135 + YajC
TC HRGMv2_0947_1 HRGMv2_0947_1_70 70172 70654 + 4.A.6.1.4
TC HRGMv2_0947_1 HRGMv2_0947_1_71 70745 71545 + 4.A.6.1.4
TC HRGMv2_0947_1 HRGMv2_0947_1_72 71535 72617 + 4.A.6.1.4
TF HRGMv2_0947_1 HRGMv2_0947_1_73 72803 73534 + GntR
STP HRGMv2_0947_1 HRGMv2_0947_1_74 73649 74815 + SIS | SIS
CAZyme HRGMv2_0947_1 HRGMv2_0947_1_75 74933 76102 + CE9
Gene ID: HRGMv2_0947_1_68
Type: TC
Location: 69411 - 69854 (+)
Gene ID: HRGMv2_0947_1_69
Type: pfam
Location: 69854 - 70135 (+)
Gene ID: HRGMv2_0947_1_70
Type: TC
Location: 70172 - 70654 (+)
Gene ID: HRGMv2_0947_1_71
Type: TC
Location: 70745 - 71545 (+)
Gene ID: HRGMv2_0947_1_72
Type: TC
Location: 71535 - 72617 (+)
Gene ID: HRGMv2_0947_1_73
Type: TF
Location: 72803 - 73534 (+)
Gene ID: HRGMv2_0947_1_74
Type: STP
Location: 73649 - 74815 (+)
Gene ID: HRGMv2_0947_1_75
Type: CAZyme
Location: 74933 - 76102 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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