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Cluster: HRGMv2_0946_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0946_12 HRGMv2_0946_12_10 9501 11177 + 3.A.1.5.35
TC HRGMv2_0946_12 HRGMv2_0946_12_11 11334 12371 + 3.A.1.5.37
TC HRGMv2_0946_12 HRGMv2_0946_12_12 12386 13321 + 3.A.1.5.11
TC HRGMv2_0946_12 HRGMv2_0946_12_13 13324 14415 + 3.A.1.5.34
TC HRGMv2_0946_12 HRGMv2_0946_12_14 14415 15443 + 3.A.1.5.36
STP HRGMv2_0946_12 HRGMv2_0946_12_15 16192 18537 + GAF | SpoIIE
STP HRGMv2_0946_12 HRGMv2_0946_12_16 18616 19362 + STAS
CAZyme HRGMv2_0946_12 HRGMv2_0946_12_17 20293 22026 + GH13_30
Gene ID: HRGMv2_0946_12_10
Type: TC
Location: 9501 - 11177 (+)
Gene ID: HRGMv2_0946_12_11
Type: TC
Location: 11334 - 12371 (+)
Gene ID: HRGMv2_0946_12_12
Type: TC
Location: 12386 - 13321 (+)
Gene ID: HRGMv2_0946_12_13
Type: TC
Location: 13324 - 14415 (+)
Gene ID: HRGMv2_0946_12_14
Type: TC
Location: 14415 - 15443 (+)
Gene ID: HRGMv2_0946_12_15
Type: STP
Location: 16192 - 18537 (+)
Gene ID: HRGMv2_0946_12_16
Type: STP
Location: 18616 - 19362 (+)
Gene ID: HRGMv2_0946_12_17
Type: CAZyme
Location: 20293 - 22026 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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