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Cluster: HRGMv2_0946_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0946_9 HRGMv2_0946_9_34 38053 40392 - 3.A.3.5.15
STP HRGMv2_0946_9 HRGMv2_0946_9_35 40885 42969 - Pkinase
STP HRGMv2_0946_9 HRGMv2_0946_9_36 43141 44103 - FHA
TC HRGMv2_0946_9 HRGMv2_0946_9_37 44611 46854 + 1.I.1.1.3
STP HRGMv2_0946_9 HRGMv2_0946_9_38 47475 48236 + Fer4
TC HRGMv2_0946_9 HRGMv2_0946_9_39 48660 49172 + 4.A.1.2.11
pfam HRGMv2_0946_9 HRGMv2_0946_9_40 49179 50045 + PRD | PRD | CAT_RBD
TC HRGMv2_0946_9 HRGMv2_0946_9_41 50145 51761 + 4.A.1.1.3
CAZyme HRGMv2_0946_9 HRGMv2_0946_9_42 51765 53147 + GH4
Gene ID: HRGMv2_0946_9_34
Type: TC
Location: 38053 - 40392 (-)
Gene ID: HRGMv2_0946_9_35
Type: STP
Location: 40885 - 42969 (-)
Gene ID: HRGMv2_0946_9_36
Type: STP
Location: 43141 - 44103 (-)
Gene ID: HRGMv2_0946_9_37
Type: TC
Location: 44611 - 46854 (+)
Gene ID: HRGMv2_0946_9_38
Type: STP
Location: 47475 - 48236 (+)
Gene ID: HRGMv2_0946_9_39
Type: TC
Location: 48660 - 49172 (+)
Gene ID: HRGMv2_0946_9_40
Type: pfam
Location: 49179 - 50045 (+)
Gene ID: HRGMv2_0946_9_41
Type: TC
Location: 50145 - 51761 (+)
Gene ID: HRGMv2_0946_9_42
Type: CAZyme
Location: 51765 - 53147 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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