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Cluster: HRGMv2_0946_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0946_37 HRGMv2_0946_37_9 8883 9326 + 4.A.6.1.16
pfam HRGMv2_0946_37 HRGMv2_0946_37_10 9326 9607 + YajC
TC HRGMv2_0946_37 HRGMv2_0946_37_11 9644 10126 + 4.A.6.1.4
TC HRGMv2_0946_37 HRGMv2_0946_37_12 10217 11017 + 4.A.6.1.4
TC HRGMv2_0946_37 HRGMv2_0946_37_13 11007 12089 + 4.A.6.1.4
TF HRGMv2_0946_37 HRGMv2_0946_37_14 12275 13006 + GntR
STP HRGMv2_0946_37 HRGMv2_0946_37_15 13121 14287 + SIS | SIS
CAZyme HRGMv2_0946_37 HRGMv2_0946_37_16 14405 15574 + CE9
Gene ID: HRGMv2_0946_37_9
Type: TC
Location: 8883 - 9326 (+)
Gene ID: HRGMv2_0946_37_10
Type: pfam
Location: 9326 - 9607 (+)
Gene ID: HRGMv2_0946_37_11
Type: TC
Location: 9644 - 10126 (+)
Gene ID: HRGMv2_0946_37_12
Type: TC
Location: 10217 - 11017 (+)
Gene ID: HRGMv2_0946_37_13
Type: TC
Location: 11007 - 12089 (+)
Gene ID: HRGMv2_0946_37_14
Type: TF
Location: 12275 - 13006 (+)
Gene ID: HRGMv2_0946_37_15
Type: STP
Location: 13121 - 14287 (+)
Gene ID: HRGMv2_0946_37_16
Type: CAZyme
Location: 14405 - 15574 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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