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Cluster: HRGMv2_0946_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0946_14 HRGMv2_0946_14_11 14842 17292 - 4.A.1.1.8
TF HRGMv2_0946_14 HRGMv2_0946_14_12 17522 18241 + GntR
TC HRGMv2_0946_14 HRGMv2_0946_14_13 18547 19863 + 3.A.1.1.45
TC HRGMv2_0946_14 HRGMv2_0946_14_14 19951 20805 + 3.A.1.1.45
TC HRGMv2_0946_14 HRGMv2_0946_14_15 20805 21644 + 3.A.1.1.45
TC HRGMv2_0946_14 HRGMv2_0946_14_16 21713 22912 + 3.A.1.1.22
CAZyme HRGMv2_0946_14 HRGMv2_0946_14_17 23289 25556 - GT35
CAZyme HRGMv2_0946_14 HRGMv2_0946_14_18 25685 27190 - GH77
Gene ID: HRGMv2_0946_14_11
Type: TC
Location: 14842 - 17292 (-)
Gene ID: HRGMv2_0946_14_12
Type: TF
Location: 17522 - 18241 (+)
Gene ID: HRGMv2_0946_14_13
Type: TC
Location: 18547 - 19863 (+)
Gene ID: HRGMv2_0946_14_14
Type: TC
Location: 19951 - 20805 (+)
Gene ID: HRGMv2_0946_14_15
Type: TC
Location: 20805 - 21644 (+)
Gene ID: HRGMv2_0946_14_16
Type: TC
Location: 21713 - 22912 (+)
Gene ID: HRGMv2_0946_14_17
Type: CAZyme
Location: 23289 - 25556 (-)
Gene ID: HRGMv2_0946_14_18
Type: CAZyme
Location: 25685 - 27190 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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