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Cluster: HRGMv2_0945_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0945_34 HRGMv2_0945_34_7 5093 5536 + 4.A.6.1.16
pfam HRGMv2_0945_34 HRGMv2_0945_34_8 5536 5817 + YajC
TC HRGMv2_0945_34 HRGMv2_0945_34_9 5854 6336 + 4.A.6.1.4
TC HRGMv2_0945_34 HRGMv2_0945_34_10 6427 7227 + 4.A.6.1.4
TC HRGMv2_0945_34 HRGMv2_0945_34_11 7217 8299 + 4.A.6.1.4
TF HRGMv2_0945_34 HRGMv2_0945_34_12 8485 9216 + GntR
STP HRGMv2_0945_34 HRGMv2_0945_34_13 9331 10497 + SIS | SIS
CAZyme HRGMv2_0945_34 HRGMv2_0945_34_14 10615 11784 + CE9
Gene ID: HRGMv2_0945_34_7
Type: TC
Location: 5093 - 5536 (+)
Gene ID: HRGMv2_0945_34_8
Type: pfam
Location: 5536 - 5817 (+)
Gene ID: HRGMv2_0945_34_9
Type: TC
Location: 5854 - 6336 (+)
Gene ID: HRGMv2_0945_34_10
Type: TC
Location: 6427 - 7227 (+)
Gene ID: HRGMv2_0945_34_11
Type: TC
Location: 7217 - 8299 (+)
Gene ID: HRGMv2_0945_34_12
Type: TF
Location: 8485 - 9216 (+)
Gene ID: HRGMv2_0945_34_13
Type: STP
Location: 9331 - 10497 (+)
Gene ID: HRGMv2_0945_34_14
Type: CAZyme
Location: 10615 - 11784 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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