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Cluster: HRGMv2_0944_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0944_4 HRGMv2_0944_4_15 19336 20712 - GH13_20
TC HRGMv2_0944_4 HRGMv2_0944_4_16 20866 22062 - 2.A.1.2.18
TC HRGMv2_0944_4 HRGMv2_0944_4_17 22184 24544 - 9.A.8.1.6
peptidase HRGMv2_0944_4 HRGMv2_0944_4_18 25024 25923 - S09.UPW
TC HRGMv2_0944_4 HRGMv2_0944_4_19 26167 26730 + 4.A.1.2.6
pfam HRGMv2_0944_4 HRGMv2_0944_4_20 26912 28315 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) HRGMv2_0944_4 HRGMv2_0944_4_21 28574 29359 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0944_4 HRGMv2_0944_4_22 29520 30500 + 3.A.1.34.1
TC HRGMv2_0944_4 HRGMv2_0944_4_23 30704 31627 + 3.A.1.34.1
TC HRGMv2_0944_4 HRGMv2_0944_4_24 31620 32414 + 3.A.1.34.1
Gene ID: HRGMv2_0944_4_15
Type: CAZyme
Location: 19336 - 20712 (-)
Gene ID: HRGMv2_0944_4_16
Type: TC
Location: 20866 - 22062 (-)
Gene ID: HRGMv2_0944_4_17
Type: TC
Location: 22184 - 24544 (-)
Gene ID: HRGMv2_0944_4_18
Type: peptidase
Location: 25024 - 25923 (-)
Gene ID: HRGMv2_0944_4_19
Type: TC
Location: 26167 - 26730 (+)
Gene ID: HRGMv2_0944_4_20
Type: pfam
Location: 26912 - 28315 (+)
Gene ID: HRGMv2_0944_4_21
Type:
Location: 28574 - 29359 (+)
Gene ID: HRGMv2_0944_4_22
Type: TC
Location: 29520 - 30500 (+)
Gene ID: HRGMv2_0944_4_23
Type: TC
Location: 30704 - 31627 (+)
Gene ID: HRGMv2_0944_4_24
Type: TC
Location: 31620 - 32414 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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