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Cluster: HRGMv2_0944_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0944_3 HRGMv2_0944_3_69 70271 71197 - CE7
TC HRGMv2_0944_3 HRGMv2_0944_3_70 71329 72156 - 3.A.1.5.27
TC HRGMv2_0944_3 HRGMv2_0944_3_71 72157 74172 - 3.A.1.5.25
TC HRGMv2_0944_3 HRGMv2_0944_3_72 74176 75132 - 3.A.1.5.38
TC HRGMv2_0944_3 HRGMv2_0944_3_73 75288 76901 - 3.A.1.5.27
pfam HRGMv2_0944_3 HRGMv2_0944_3_74 77267 79207 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0944_3 HRGMv2_0944_3_75 79214 80896 - 2.A.66.4.4
Gene ID: HRGMv2_0944_3_69
Type: CAZyme
Location: 70271 - 71197 (-)
Gene ID: HRGMv2_0944_3_70
Type: TC
Location: 71329 - 72156 (-)
Gene ID: HRGMv2_0944_3_71
Type: TC
Location: 72157 - 74172 (-)
Gene ID: HRGMv2_0944_3_72
Type: TC
Location: 74176 - 75132 (-)
Gene ID: HRGMv2_0944_3_73
Type: TC
Location: 75288 - 76901 (-)
Gene ID: HRGMv2_0944_3_74
Type: pfam
Location: 77267 - 79207 (-)
Gene ID: HRGMv2_0944_3_75
Type: TC
Location: 79214 - 80896 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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