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Cluster: HRGMv2_0944_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0944_3 HRGMv2_0944_3_50 46729 48936 - GH13_30
STP HRGMv2_0944_3 HRGMv2_0944_3_51 49048 49794 - STAS
STP HRGMv2_0944_3 HRGMv2_0944_3_52 49873 52218 - GAF | SpoIIE
TC HRGMv2_0944_3 HRGMv2_0944_3_53 52965 54017 - 3.A.1.5.37
TC HRGMv2_0944_3 HRGMv2_0944_3_54 54017 55108 - 3.A.1.5.34
TC HRGMv2_0944_3 HRGMv2_0944_3_55 55111 56046 - 3.A.1.5.11
TC HRGMv2_0944_3 HRGMv2_0944_3_56 56061 57098 - 3.A.1.5.37
TC HRGMv2_0944_3 HRGMv2_0944_3_57 57255 58931 - 3.A.1.5.35
Gene ID: HRGMv2_0944_3_50
Type: CAZyme
Location: 46729 - 48936 (-)
Gene ID: HRGMv2_0944_3_51
Type: STP
Location: 49048 - 49794 (-)
Gene ID: HRGMv2_0944_3_52
Type: STP
Location: 49873 - 52218 (-)
Gene ID: HRGMv2_0944_3_53
Type: TC
Location: 52965 - 54017 (-)
Gene ID: HRGMv2_0944_3_54
Type: TC
Location: 54017 - 55108 (-)
Gene ID: HRGMv2_0944_3_55
Type: TC
Location: 55111 - 56046 (-)
Gene ID: HRGMv2_0944_3_56
Type: TC
Location: 56061 - 57098 (-)
Gene ID: HRGMv2_0944_3_57
Type: TC
Location: 57255 - 58931 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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