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Cluster: HRGMv2_0944_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0944_11 HRGMv2_0944_11_4 3680 5056 - 3.A.1.17.10
NULL(UNKNOWN) HRGMv2_0944_11 HRGMv2_0944_11_5 5060 6118 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0944_11 HRGMv2_0944_11_6 6121 7932 - 3.D.1.5.1
STP HRGMv2_0944_11 HRGMv2_0944_11_7 7926 9758 - Pyr_redox_2
CAZyme HRGMv2_0944_11 HRGMv2_0944_11_8 10032 11414 - GH4
TC HRGMv2_0944_11 HRGMv2_0944_11_9 11418 13034 - 4.A.1.1.3
pfam HRGMv2_0944_11 HRGMv2_0944_11_10 13134 14000 - PRD | PRD | CAT_RBD
TC HRGMv2_0944_11 HRGMv2_0944_11_11 14007 14519 - 4.A.1.2.11
STP HRGMv2_0944_11 HRGMv2_0944_11_12 14864 15625 - Fer4
TC HRGMv2_0944_11 HRGMv2_0944_11_13 16250 18508 - 1.I.1.1.3
Gene ID: HRGMv2_0944_11_4
Type: TC
Location: 3680 - 5056 (-)
Gene ID: HRGMv2_0944_11_5
Type:
Location: 5060 - 6118 (-)
Gene ID: HRGMv2_0944_11_6
Type: TC
Location: 6121 - 7932 (-)
Gene ID: HRGMv2_0944_11_7
Type: STP
Location: 7926 - 9758 (-)
Gene ID: HRGMv2_0944_11_8
Type: CAZyme
Location: 10032 - 11414 (-)
Gene ID: HRGMv2_0944_11_9
Type: TC
Location: 11418 - 13034 (-)
Gene ID: HRGMv2_0944_11_10
Type: pfam
Location: 13134 - 14000 (-)
Gene ID: HRGMv2_0944_11_11
Type: TC
Location: 14007 - 14519 (-)
Gene ID: HRGMv2_0944_11_12
Type: STP
Location: 14864 - 15625 (-)
Gene ID: HRGMv2_0944_11_13
Type: TC
Location: 16250 - 18508 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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