dbCAN Logo

Cluster: HRGMv2_0943_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0943_5 HRGMv2_0943_5_3 3465 4406 - GT2
pfam HRGMv2_0943_5 HRGMv2_0943_5_4 4403 5644 - Wzy_C
pfam HRGMv2_0943_5 HRGMv2_0943_5_5 5637 6731 - PS_pyruv_trans
CAZyme HRGMv2_0943_5 HRGMv2_0943_5_6 6734 7741 - GT2
CAZyme HRGMv2_0943_5 HRGMv2_0943_5_7 7760 8773 - GT32
CAZyme HRGMv2_0943_5 HRGMv2_0943_5_8 8766 10049 - GT4
CAZyme HRGMv2_0943_5 HRGMv2_0943_5_9 10046 11170 - GT4
TC HRGMv2_0943_5 HRGMv2_0943_5_10 11171 11992 - 9.B.18.1.2
Gene ID: HRGMv2_0943_5_3
Type: CAZyme
Location: 3465 - 4406 (-)
Gene ID: HRGMv2_0943_5_4
Type: pfam
Location: 4403 - 5644 (-)
Gene ID: HRGMv2_0943_5_5
Type: pfam
Location: 5637 - 6731 (-)
Gene ID: HRGMv2_0943_5_6
Type: CAZyme
Location: 6734 - 7741 (-)
Gene ID: HRGMv2_0943_5_7
Type: CAZyme
Location: 7760 - 8773 (-)
Gene ID: HRGMv2_0943_5_8
Type: CAZyme
Location: 8766 - 10049 (-)
Gene ID: HRGMv2_0943_5_9
Type: CAZyme
Location: 10046 - 11170 (-)
Gene ID: HRGMv2_0943_5_10
Type: TC
Location: 11171 - 11992 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0943_5_8 vegetarian > vegan 1.65300 0.02773
HRGMv2_0943_5_9 vegetarian > vegan 2.89007 0.02773

🧭 Explore Read Mapping of CGC

← Back to Cluster List