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Cluster: HRGMv2_0943_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0943_24 HRGMv2_0943_24_13 15289 17739 - 4.A.1.1.8
TF HRGMv2_0943_24 HRGMv2_0943_24_14 17964 18683 + GntR
TC HRGMv2_0943_24 HRGMv2_0943_24_15 18990 20306 + 3.A.1.1.45
TC HRGMv2_0943_24 HRGMv2_0943_24_16 20394 21248 + 3.A.1.1.45
TC HRGMv2_0943_24 HRGMv2_0943_24_17 21248 22087 + 3.A.1.1.45
TC HRGMv2_0943_24 HRGMv2_0943_24_18 22156 23355 + 3.A.1.1.22
CAZyme HRGMv2_0943_24 HRGMv2_0943_24_19 23812 26079 - GT35
CAZyme HRGMv2_0943_24 HRGMv2_0943_24_20 26208 27713 - GH77
Gene ID: HRGMv2_0943_24_13
Type: TC
Location: 15289 - 17739 (-)
Gene ID: HRGMv2_0943_24_14
Type: TF
Location: 17964 - 18683 (+)
Gene ID: HRGMv2_0943_24_15
Type: TC
Location: 18990 - 20306 (+)
Gene ID: HRGMv2_0943_24_16
Type: TC
Location: 20394 - 21248 (+)
Gene ID: HRGMv2_0943_24_17
Type: TC
Location: 21248 - 22087 (+)
Gene ID: HRGMv2_0943_24_18
Type: TC
Location: 22156 - 23355 (+)
Gene ID: HRGMv2_0943_24_19
Type: CAZyme
Location: 23812 - 26079 (-)
Gene ID: HRGMv2_0943_24_20
Type: CAZyme
Location: 26208 - 27713 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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